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v0.1

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• ab9fbf0d36
  
  chore: Update measurements main v0.1 Tibo De Peuter 2025-12-19 17:54:06 +01:00
• d663f270e1
  
  feat: Improved plots Tibo De Peuter 2025-12-19 17:53:41 +01:00
• b62f06018d
  
  feat: Graphs checkpoint Tibo De Peuter 2025-12-19 00:06:14 +01:00
• 15062d8884
  
  feat: Graphs checkpoint Tibo De Peuter 2025-12-18 16:06:26 +01:00
• 2f869a8a7a
  
  chore: Restructure Tibo De Peuter 2025-12-18 11:18:39 +01:00
• dd938489ef Merge branch 'main' of github.ugent.be:ML/neural-compression RobinMeersman 2025-12-18 21:23:12 +01:00
• cad44c3be4 feat: measured autoencoder for very small files as well RobinMeersman 2025-12-18 21:22:51 +01:00
• aca2cc9003 other: cleanup unused code file Robin Meersman 2025-12-17 21:09:27 +01:00
• 8ab1741e4c Update and rename training.md to models/README.md Tibo De Peuter 2025-12-17 20:55:27 +01:00
• 834c0bd238 feat: metadata used for training the models Robin Meersman 2025-12-17 20:49:23 +01:00
• bb86371665 new graphs Robin Meersman 2025-12-17 16:52:40 +01:00
• 08f6dc2927 feat: updated some graphs, todo: legends are not yet complete Robin Meersman 2025-12-17 16:52:29 +01:00
• 46872274f4 fix: several graphs reiterated, todo: extrapolation to prove CNN will not scale well Robin Meersman 2025-12-17 15:22:20 +01:00
• 079e867763 feat: ignored macos specific files :) Robin Meersman 2025-12-17 10:39:10 +01:00
• 3bf3667849 feat: graph and measurement code for CPU lossless algorithms RobinMeersman 2025-12-16 18:54:29 +01:00
• 9cd37f156a fix: accuracy replaced by MSE loss, updated graphs RobinMeersman 2025-12-16 18:12:10 +01:00
• 5bf45e47a5 results RobinMeersman 2025-12-16 10:10:39 +01:00
• 1abc2f5113 feat: graphs + models + updated finished graph code + data in csv RobinMeersman 2025-12-16 10:06:47 +01:00
• f3b07c1df3 feat: measuring code + graph generator code RobinMeersman 2025-12-15 22:53:32 +01:00
• dd0b3d3945 graphs notebook RobinMeersman 2025-12-14 18:36:52 +01:00
• 5bb254d6c2 feat: new CNN, start of creating graphs RobinMeersman 2025-12-14 18:36:40 +01:00
• 17e0b52600 feat: autoencoder + updated trainers + cleaned up process to allow using autoencoder RobinMeersman 2025-12-14 14:37:04 +01:00
• 0ab495165f Merge pull request #13 from ML/autoencoder Robin Meersman 2025-12-13 18:04:09 +01:00
• 04fa7c2387 Merge pull request #12 from ML/process Robin Meersman 2025-12-13 18:03:27 +01:00
• a4a41d190b changes to training + added autoencoder RobinMeersman 2025-12-13 17:53:01 +01:00
• 6e591bb470 backup RobinMeersman 2025-12-13 15:19:58 +01:00
• 41d22d9dd5 backup RobinMeersman 2025-12-13 15:08:58 +01:00
• b178c097d8 fix: conflicts RobinMeersman 2025-12-13 11:27:46 +01:00
• 7b9202e64f
  
  Merge branch 'config' into process Tibo De Peuter 2025-12-12 10:07:44 +01:00
• 961d642dd8
  
  fixup! WIP: Attempt at switching Tibo De Peuter 2025-12-11 23:58:54 +01:00
• 2c0e0c2278
  
  WIP: Attempt at switching Tibo De Peuter 2025-12-11 23:24:34 +01:00
• 817c16bde4
  
  chore: Add reference AE Tibo De Peuter 2025-12-11 23:24:11 +01:00
• fc75ab51b0
  
  fix: No hardcoding context len Tibo De Peuter 2025-12-11 23:23:55 +01:00
• 4c8d603092
  
  Merge branch 'main' into process Tibo De Peuter 2025-12-11 23:16:25 +01:00
• 1143acc415
  
  chore: Replace firefox with 7zip (smaller) config Tibo De Peuter 2025-12-11 22:45:46 +01:00
• eec3b2b1e6 feat: decompression Robin Meersman 2025-12-11 22:45:28 +01:00
• ff11c1deb3
  
  Add testing configs Tibo De Peuter 2025-12-11 22:21:47 +01:00
• 77b80914e8 fix: encoding binary now SUPAH fast Robin Meersman 2025-12-11 20:36:24 +01:00
• 9250777691
  
  fix: Also write numbers Tibo De Peuter 2025-12-11 18:08:19 +01:00
• e81997f129
  
  feat: Device override cli arg Tibo De Peuter 2025-12-11 16:23:57 +01:00
• 97e84a97db
  
  feat: Results dir Tibo De Peuter 2025-12-11 15:38:43 +01:00
• 653b44804a feat: faster encoding binary Robin Meersman 2025-12-11 15:22:28 +01:00
• 5de8181959
  
  chore: Add Nix configs Tibo De Peuter 2025-12-11 14:41:20 +01:00
• a4583d402b
  
  feat: Context CLI arg Tibo De Peuter 2025-12-11 13:58:38 +01:00
• cd74949b74
  
  feat: Smaller genome dataset Tibo De Peuter 2025-12-11 13:38:52 +01:00
• 5c26a52e16
  
  feat (WIP): Compress Tibo De Peuter 2025-12-10 21:13:09 +01:00
• d0457b6571 Merge pull request #5 from ML/portability Robin Meersman 2025-12-10 21:10:09 +01:00
• 64bbae6300
  
  fixup! feat: Size arg Tibo De Peuter 2025-12-10 16:34:53 +01:00
• 67310ce4f4
  
  feat: Size arg Tibo De Peuter 2025-12-10 16:29:39 +01:00
• 6c5908e6ae
  
  fix: NoneType epochs Tibo De Peuter 2025-12-10 15:37:54 +01:00
• 63119980c9 Merge branch 'portability' of github.ugent.be:ML/neural-compression into portability Robin Meersman 2025-12-10 14:46:20 +01:00
• d12bb25d0a feat: transformer fixed Robin Meersman 2025-12-10 14:46:10 +01:00
• 956ff79fa1
  
  fix: Subset Optuna Tibo De Peuter 2025-12-10 11:09:44 +01:00
• 51e0ed7fc0
  
  chore: Job cnn-enwik9-optuna Tibo De Peuter 2025-12-10 10:34:06 +01:00
• e54301e046
  
  fixup! chore: Lower datasets version Tibo De Peuter 2025-12-10 10:17:38 +01:00
• 48e771420e
  
  chore: Lower datasets version Tibo De Peuter 2025-12-10 10:11:03 +01:00
• 962230b6e1
  
  fix: Manual selection of device Tibo De Peuter 2025-12-10 09:57:24 +01:00
• 20cbd61a82
  
  chore: More verbose dataloading Tibo De Peuter 2025-12-10 00:02:10 +01:00
• 2de9e87470
  
  Merge branch 'fix/full-dataset' into portability Tibo De Peuter 2025-12-09 22:54:08 +01:00
• 209bf2403d
  
  fix: Avoid copy list conversion Tibo De Peuter 2025-12-09 22:50:59 +01:00
• f97c7c9130 feat: added simple check to distinguish other model types from transformer Robin Meersman 2025-12-09 22:24:14 +01:00
• 291be01069
  
  fix: Offsets Tibo De Peuter 2025-12-09 22:08:52 +01:00
• 3258da3015 feat: encoder skeleton code Robin Meersman 2025-12-09 21:07:43 +01:00
• 926cde17d3
  
  Checkpoint Tibo De Peuter 2025-12-09 15:10:12 +01:00
• 8311eabd4d
  
  fix: Properly pass device Tibo De Peuter 2025-12-09 14:50:25 +01:00
• 28ae8191ad
  
  fix: Runtime errors Tibo De Peuter 2025-12-08 11:14:36 +01:00
• abbf749029
  
  chore: Update README usage Tibo De Peuter 2025-12-07 22:05:59 +01:00
• 37ab43c134
  
  fix: Check paths Tibo De Peuter 2025-12-07 21:56:47 +01:00
• ee4d94e157
  
  feat: Time+memory tracking Tibo De Peuter 2025-12-07 21:49:45 +01:00
• 59722acf76
  
  fix: Transformer Optuna params Tibo De Peuter 2025-12-07 20:45:29 +01:00
• ef50d6321e
  
  feat: Add model choice Tibo De Peuter 2025-12-06 21:52:31 +01:00
• bb241154d9
  
  Merge branch 'main' into portability Tibo De Peuter 2025-12-06 20:24:13 +01:00
• c8f2f860e6 Merge pull request #8 from ML/transformer Tibo De Peuter 2025-12-06 20:23:46 +01:00
• 9dff723bba
  
  chore: Start compression path Tibo De Peuter 2025-12-05 12:38:10 +01:00
• f32f4678e1
  
  chore: Restructure Tibo De Peuter 2025-12-05 12:37:48 +01:00
• 8b6c4e17ab
  
  fix: Ignore saved models Tibo De Peuter 2025-12-05 11:01:15 +01:00
• 013afe832f
  
  Merge branch 'main' into portability Tibo De Peuter 2025-12-05 10:58:07 +01:00
• befb1a96a5
  
  Streamline datasets Tibo De Peuter 2025-12-04 23:13:16 +01:00
• c9758e1e40 feat: transformer Robin Meersman 2025-11-30 22:50:19 +01:00
• 849bcd7b77
  
  feat: Human genome dataset Tibo De Peuter 2025-11-30 21:59:13 +01:00
• b74ae7083a
  
  chore: Also add datapaths to job Tibo De Peuter 2025-11-30 21:58:57 +01:00
• 81c767371e
  
  feat: Choose dataset with options Tibo De Peuter 2025-11-30 20:19:39 +01:00
• 20bdd4f566
  
  fix: Readd matplotlib Tibo De Peuter 2025-11-30 19:27:35 +01:00
• d74558557c Merge pull request #4 from ML/code-cleanup Robin Meersman 2025-11-30 19:25:40 +01:00
• 73d1742cbd code cleanup Robin Meersman 2025-11-30 19:21:29 +01:00
• a5ee44b4c2
  
  chore: Change versions, setup HPC Tibo De Peuter 2025-11-30 16:49:55 +01:00
• ea9cf12db0 fix: accelerator module is not available on HPC pytorch version Robin Meersman 2025-11-28 09:58:55 +01:00
• f026be49aa feat: job script Robin Meersman 2025-11-28 09:57:54 +01:00
• 0577eee601 fix: enwik dataset fix Robin Meersman 2025-11-28 09:27:37 +01:00
• fe207962de feat: optuna optimization performed RobinMeersman 2025-11-27 22:35:27 +01:00
• 2ab4abdf93 Merge pull request #3 from ML/model-rewrite Robin Meersman 2025-11-27 19:27:31 +01:00
• d2e6d17f55 feat: updates to datasets/-loaders RobinMeersman 2025-11-27 19:26:59 +01:00
• eb4a014aa1 fix: fixed model shapes + redit training loop Robin Meersman 2025-11-27 14:11:53 +01:00
• ed44d5b283 feat: datasets package RobinMeersman 2025-11-25 20:20:34 +01:00
• 6de4db24cc feat: uhm, i changed some things RobinMeersman 2025-11-25 20:20:08 +01:00
• b58682cb49 feat: model --> ready to test train Robin Meersman 2025-11-08 20:55:05 +01:00
• 63d1b6f5ae feat: i think i set up the encoder Robin Meersman 2025-11-08 17:40:49 +01:00
• 947aba31ee feat: CNN model start + rude concept of training Robin Meersman 2025-11-07 23:17:29 +01:00
• d6c8bf4a13 Merge branch 'main' of github.ugent.be:ML/neural-compression Robin Meersman 2025-11-07 13:01:36 +01:00
• 35db9637b1 feat: uv interpreter Robin Meersman 2025-11-07 13:01:04 +01:00