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Merge pull request #21 from SELab-3-2026/simulate-results

Model Simulation
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Jona Reynaert 2026-04-23 10:09:42 +02:00 committed by GitHub
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6 changed files with 754 additions and 73 deletions

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@ -4,8 +4,12 @@
# Path to the trained model (optional)
model_path: null
# Type of model to use if no path is provided (e.g., random)
model_type: "random"
# Script behavior
headless: false
# In headless mode this is required; in viewer mode null means "infinite".
max_steps: null
# Execution backend (MJX or BRAX)
backend: "MJX"
# Optional: path to the Hydra config.yaml used during training.
# When set, scripts/simulate.py will use it to default morphology/arena/environment/architecture
# to match training (unless you explicitly override those keys via CLI).
trained_config_path: null

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@ -3,91 +3,676 @@
Uses Hydra to load the same BrittleStarConfig that was used during training.
Override settings via CLI, e.g.:
python scripts/simulate.py morphology=3_arms
To replay a run using the *exact* Hydra config used during training, pass:
python scripts/simulate.py simulation.trained_config_path=runs/.../.hydra/config.yaml \
simulation.model_path=runs/.../final_model.flax
"""
from __future__ import annotations
import hydra
from omegaconf import DictConfig, OmegaConf
import itertools
import time
from pathlib import Path
from typing import Any
from brittle_star_project import (
BrittleStarEnv,
BrittleStarEnvFactory,
SimulationConfig,
simulate_policy,
)
import flax
import hydra
import jax
import jax.numpy as jnp
import numpy as np
import yaml
from omegaconf import DictConfig, OmegaConf, open_dict
from brittle_star_project import Backend, BrittleStarEnv, BrittleStarEnvFactory
from brittle_star_project.configs.main_config import BrittleStarConfig
from brittle_star_project.configs.register_configs import register_configs
from brittle_star_project.rl import RLModel
from brittle_star_project.rl.base import get_rl_model_registry
from brittle_star_project.environment.padded_obs_wrapper import (
compute_padding_masks,
pad_observation,
)
MODEL_BY_NAME = get_rl_model_registry()
MODEL_OPTIONS = sorted(MODEL_BY_NAME)
_ALLOWED_OBS_KEYS = {
"joint_position",
"joint_velocity",
"joint_actuator_force",
"actuator_force",
"disk_position",
"disk_rotation",
"disk_linear_velocity",
"disk_angular_velocity",
"unit_xy_direction_to_target",
"xy_distance_to_target",
}
def _dense_layer_sizes_from_params(params: Any) -> list[int]:
"""Infer GenericDenseLayersWithActivation.layer_sizes from a Flax params tree."""
try:
dense_params = params["params"]
except Exception as exc:
raise ValueError("Unexpected sensor params structure (missing 'params')") from exc
layer_sizes: list[int] = []
idx = 0
while True:
key = f"Dense_{idx}"
if key not in dense_params:
break
kernel = dense_params[key]["kernel"]
layer_sizes.append(int(np.asarray(kernel).shape[1]))
idx += 1
if not layer_sizes:
raise ValueError("Could not infer Dense_* layers from sensor params")
return layer_sizes
def _infer_action_dim_from_actor_params(params: Any) -> int | None:
"""Best-effort infer action_dim from a Flax Actor params tree."""
try:
dense0 = params["params"]["Dense_0"]
bias = dense0.get("bias")
kernel = dense0.get("kernel")
except Exception:
return None
if bias is not None:
try:
return int(np.asarray(bias).shape[0])
except Exception:
return None
if kernel is not None:
try:
return int(np.asarray(kernel).shape[1])
except Exception:
return None
return None
def _has_cli_override(overrides: list[str], key: str) -> bool:
prefixes = (f"{key}=", f"{key}.", f"+{key}=", f"+{key}.")
return any(str(o).startswith(prefixes) for o in overrides)
def _maybe_clip_action(
action: np.ndarray,
low: np.ndarray | None,
high: np.ndarray | None,
) -> np.ndarray:
if low is None or high is None:
return action
low = np.asarray(low, dtype=np.float32).ravel()
high = np.asarray(high, dtype=np.float32).ravel()
if low.shape != action.shape or high.shape != action.shape:
return action
return np.clip(action, low, high)
def _transform_obs_dict(obs_dict: dict[str, Any]) -> jnp.ndarray:
"""Flatten the env's observation dict into a 1D vector.
Matches training behavior:
- only includes keys in _ALLOWED_OBS_KEYS
- iterates keys in sorted order for stable layout
- skips empty arrays
"""
parts: list[jnp.ndarray] = []
for key in sorted(obs_dict.keys()):
if key not in _ALLOWED_OBS_KEYS:
continue
arr = jnp.asarray(obs_dict[key])
if arr.size == 0:
continue
parts.append(arr.reshape((-1,)))
if not parts:
return jnp.zeros((0,), dtype=jnp.float32)
return jnp.concatenate(parts, axis=0)
# A minimal policy class to load a CleanRL/Flax checkpoint and run inference.
class CleanRLPPOPolicy:
def __init__(
self,
*,
sensor_params: Any,
actor_params: Any,
action_dim: int,
) -> None:
from brittle_star_project.MLPs.mlps import Actor, GenericDenseLayersWithActivation
layer_sizes = _dense_layer_sizes_from_params(sensor_params)
self._sensor = GenericDenseLayersWithActivation(layer_sizes=layer_sizes)
self._actor = Actor(action_dim=action_dim)
self._sensor_apply = jax.jit(self._sensor.apply)
self._actor_apply = jax.jit(self._actor.apply)
self._params = {
"sensor_params": sensor_params,
"actor_params": actor_params,
}
@staticmethod
def load(
path: Path,
*,
action_dim: int,
) -> "CleanRLPPOPolicy":
def _get_index(container: Any, idx: int) -> Any:
if isinstance(container, (list, tuple)):
return container[idx]
if isinstance(container, dict):
return container.get(idx, container.get(str(idx)))
raise KeyError(idx)
def _looks_like_indexed_dict(container: Any) -> bool:
return (
isinstance(container, dict)
and container
and all(str(k).isdigit() for k in container.keys())
)
def _parse_checkpoint(restored_obj: Any) -> tuple[Any, Any, Any, Any, Any]:
"""Extract checkpoint parts.
Returns (config_dict, sensor_params, actor_params, critic_params,
feature_extractor_params).
PPOTrainer saves:
flax.serialization.to_bytes([
config_dict,
[sensor_params, actor_params, critic_params, feature_extractor_params],
])
msgpack_restore() may restore lists as dicts keyed by string indices
("0", "1", ...), so we accept both shapes.
"""
cfg_part: Any | None = None
params_part: Any = restored_obj
if isinstance(restored_obj, (list, tuple)) and len(restored_obj) >= 2:
cfg_part = restored_obj[0]
params_part = restored_obj[1]
elif _looks_like_indexed_dict(restored_obj) and (
"0" in restored_obj or "1" in restored_obj
):
cfg_part = restored_obj.get("0", restored_obj.get(0))
params_part = restored_obj.get("1", restored_obj.get(1))
if _looks_like_indexed_dict(params_part):
sensor_params = _get_index(params_part, 0)
actor_params = _get_index(params_part, 1)
critic_params = _get_index(params_part, 2)
feature_extractor_params = _get_index(params_part, 3)
if sensor_params is None or actor_params is None:
raise ValueError("Missing required params in checkpoint")
return (
cfg_part,
sensor_params,
actor_params,
critic_params,
feature_extractor_params,
)
if isinstance(params_part, (list, tuple)) and len(params_part) >= 2:
sensor_params = params_part[0]
actor_params = params_part[1]
critic_params = params_part[2] if len(params_part) >= 3 else None
feature_extractor_params = params_part[3] if len(params_part) >= 4 else None
return (
cfg_part,
sensor_params,
actor_params,
critic_params,
feature_extractor_params,
)
# Accept a plain dict-shaped Flax params mapping commonly produced
# by saving `agent_state.params` directly. Typical keys are
# 'sensor_params' and 'actor_params', or sometimes nested under 'params'.
if isinstance(restored_obj, dict):
# Top-level params dict
params_sub = restored_obj.get("params", {})
sensor_params = restored_obj.get("sensor_params") or params_sub.get("sensor_params")
actor_params = restored_obj.get("actor_params") or params_sub.get("actor_params")
critic_params = restored_obj.get("critic_params") or params_sub.get("critic_params")
feature_extractor_params = restored_obj.get(
"feature_extractor_params"
) or params_sub.get("feature_extractor_params")
# Some checkpoints only save actor+sensor as top-level
if sensor_params is not None and actor_params is not None:
return (
cfg_part,
sensor_params,
actor_params,
critic_params,
feature_extractor_params,
)
raise ValueError(
f"Unexpected checkpoint structure in {path}. "
"Expected [config_dict, [sensor_params, actor_params, critic_params, "
"feature_extractor_params]] or an equivalent dict-indexed variant."
)
payload = path.read_bytes()
restored = flax.serialization.msgpack_restore(payload)
_cfg_dict, sensor_params, actor_params, _critic_params, _feature_extractor_params = (
_parse_checkpoint(restored)
)
ckpt_action_dim = _infer_action_dim_from_actor_params(actor_params)
if ckpt_action_dim is not None and ckpt_action_dim != action_dim:
raise ValueError(
"Checkpoint/env mismatch: "
f"checkpoint expects action_dim={ckpt_action_dim}, "
f"env provides action_dim={action_dim}. "
"Use the same Hydra config (morphology/arena/environment) "
"that was used during training."
)
return CleanRLPPOPolicy(
sensor_params=sensor_params,
actor_params=actor_params,
action_dim=action_dim,
)
def act(self, *, observations: dict[str, Any]) -> np.ndarray:
obs = _transform_obs_dict(observations)
hidden = self._sensor_apply(self._params["sensor_params"], obs)
mean, _log_std = self._actor_apply(self._params["actor_params"], hidden)
# Always evaluate with the actor mean.
# (Sampling adds exploration noise, which is useful for training but not for evaluation.)
return np.asarray(mean, dtype=np.float32).ravel()
def _get_observations(state: Any) -> dict[str, Any] | None:
return getattr(state, "observations", None)
def _get_xy_distance_to_target(observations: dict[str, Any]) -> float | None:
return float(np.asarray(observations["xy_distance_to_target"]).reshape(-1)[0])
def _target_reached(*, state: Any) -> bool:
return bool(getattr(state, "terminated", False) or getattr(state, "truncated", False))
def _rollout_one_episode_headless(
*,
env: BrittleStarEnv,
policy: CleanRLPPOPolicy,
seed: int,
max_steps: int,
action_low: np.ndarray | None,
action_high: np.ndarray | None,
padding_masks: dict[str, Any] | None,
) -> tuple[float, int, bool, float | None]:
"""Run one rollout up to max_steps.
Returns (return, length, reached_target, final_xy_dist).
Note: In the MJC backend, the raw env reward can be 0.0; we compute a simple
progress reward based on xy_distance_to_target.
"""
state = env.reset(seed=seed)
ep_return = 0.0
observations = _get_observations(state)
prev_dist = _get_xy_distance_to_target(observations)
reached_target = _target_reached(state=state)
steps = 0
for _ in range(int(max_steps)):
obs_dict = observations or {}
if padding_masks is not None:
obs_dict = pad_observation(obs_dict, padding_masks)
action = policy.act(observations=obs_dict)
action = _maybe_clip_action(action, action_low, action_high)
nu = int(state.mj_model.nu)
if nu > 0 and action.shape != (nu,):
raise ValueError(f"Policy returned action shape {action.shape}, expected ({nu},)")
state = env.step(state=state, action=action)
steps += 1
observations = _get_observations(state)
cur_dist = _get_xy_distance_to_target(observations)
if prev_dist is not None and cur_dist is not None:
ep_return += prev_dist - cur_dist
prev_dist = cur_dist
reached_target = _target_reached(state=state)
if reached_target:
break
final_dist = _get_xy_distance_to_target(observations)
return ep_return, steps, reached_target, final_dist
def _run_one_episode_viewer(
*,
env: BrittleStarEnv,
policy: CleanRLPPOPolicy,
seed: int,
state: Any,
control_dt: float,
max_steps: int | None,
action_low: np.ndarray | None,
action_high: np.ndarray | None,
padding_masks: dict[str, Any] | None,
) -> None:
import mujoco.viewer
model = state.mj_model
data = state.mj_data
_ = int(seed)
episode_return = 0.0
observations = _get_observations(state)
prev_dist = _get_xy_distance_to_target(observations)
reached_target = _target_reached(state=state)
steps = 0
# Use the viewer as a context manager to avoid GLX teardown races.
with mujoco.viewer.launch_passive(model, data) as viewer:
step_iter = range(int(max_steps)) if max_steps is not None else itertools.count()
for _step_idx in step_iter:
if not viewer.is_running():
break
step_start = time.time()
obs_dict = observations or {}
if padding_masks is not None:
obs_dict = pad_observation(obs_dict, padding_masks)
action = policy.act(observations=obs_dict)
action = _maybe_clip_action(action, action_low, action_high)
if model.nu > 0 and action.shape != (int(model.nu),):
raise ValueError(
f"Policy returned action shape {action.shape}, expected ({int(model.nu)},)"
)
# The passive viewer runs a GUI thread; protect MuJoCo state mutation.
with viewer.lock():
state = env.step(state=state, action=action)
if not viewer.is_running():
break
viewer.sync()
steps += 1
observations = _get_observations(state)
cur_dist = _get_xy_distance_to_target(observations)
if prev_dist is not None and cur_dist is not None:
episode_return += prev_dist - cur_dist
prev_dist = cur_dist
reached_target = _target_reached(state=state)
if reached_target:
break
remaining = control_dt - (time.time() - step_start)
if remaining > 0:
time.sleep(remaining)
dist = _get_xy_distance_to_target(observations)
dist_str = "n/a" if dist is None else f"{dist:.3f}"
print(
"episode done: "
f"return={episode_return:.6f}, len={steps}, "
f"target_reached={reached_target}, final_xy_dist={dist_str}"
)
def _infer_checkpoint_obs_dim(policy: CleanRLPPOPolicy) -> int | None:
"""Best-effort read of the first Dense kernel input dim (obs dim)."""
try:
kernel = policy._params["sensor_params"]["params"]["Dense_0"]["kernel"]
return int(getattr(kernel, "shape")[0])
except Exception:
return None
def _load_trained_config(path: Path) -> DictConfig:
"""Load a trained config YAML.
Supports both:
- Hydra's run config (e.g. runs/.../.hydra/config.yaml)
- This project's logger metadata YAMLs, which may contain
``!!python/object/apply:...`` tags for Enums.
For safety, we *do not* execute Python constructors from YAML; we only
treat these tags as data and extract their scalar arguments.
"""
if not path.exists():
raise FileNotFoundError(f"trained_config_path does not exist: '{path}'.")
if not path.is_file():
raise ValueError(f"trained_config_path must be a file, got: '{path}'.")
try:
return OmegaConf.load(path)
except Exception as exc:
python_apply_prefix = "tag:yaml.org,2002:python/object/apply:"
class _SafeLoaderWithPythonApply(yaml.SafeLoader):
pass
def _construct_python_apply(
loader: yaml.SafeLoader,
_tag_suffix: str,
node: yaml.Node,
) -> Any:
if isinstance(node, yaml.SequenceNode):
seq = loader.construct_sequence(node)
if len(seq) == 1:
return seq[0]
return seq
if isinstance(node, yaml.MappingNode):
return loader.construct_mapping(node)
return loader.construct_scalar(node)
_SafeLoaderWithPythonApply.add_multi_constructor(
python_apply_prefix, _construct_python_apply
)
try:
data = yaml.load(path.read_text(encoding="utf-8"), Loader=_SafeLoaderWithPythonApply)
except Exception as yaml_exc:
raise ValueError(
"Failed to load trained_config_path as YAML. "
"If this is a Hydra run, pass the run's '.hydra/config.yaml' file. "
f"Got: '{path}'."
) from yaml_exc
if not isinstance(data, dict):
raise ValueError(
"trained_config_path must contain a YAML mapping (dict-like) at the root. "
f"Got type={type(data).__name__} from '{path}'."
) from exc
# Normalize known enum-like strings to their Enum *names* so OmegaConf's
# structured config merge behaves like the normal Hydra config.
from brittle_star_project.environment.env_types import Task
env_cfg = data.get("environment")
if isinstance(env_cfg, dict) and isinstance(env_cfg.get("task"), str):
task_str = str(env_cfg["task"])
try:
env_cfg["task"] = Task[task_str].name
except Exception:
try:
env_cfg["task"] = Task(task_str).name
except Exception:
pass
return OmegaConf.create(data)
@hydra.main(config_path="../configs", config_name="main_config", version_base="1.3")
def main(dict_cfg: DictConfig) -> None:
# 1. Convert DictConfig to structured dataclass, ensuring the root schema is applied correctly.
config: BrittleStarConfig = OmegaConf.to_object(
OmegaConf.merge(OmegaConf.structured(BrittleStarConfig), dict_cfg)
)
# Compose against the structured schema first, so missing keys are validated.
cfg = OmegaConf.merge(OmegaConf.structured(BrittleStarConfig), dict_cfg)
# Use the configurable settings from the simulation group
backend = config.simulation.backend
model_type = config.simulation.model_type
# Optional: override env-defining sections (morphology/arena/environment/architecture)
# using the exact Hydra config that was used for training.
trained_cfg_path = cfg.simulation.trained_config_path
if trained_cfg_path:
overrides_raw = OmegaConf.select(cfg, "hydra.overrides.task") or []
overrides = [str(o) for o in overrides_raw]
# Hydra chdir changes CWD; we map CLI relative paths relative to invocation originally.
model_path = config.simulation.model_path
if model_path is not None:
model_path = hydra.utils.to_absolute_path(model_path)
trained_cfg_path_abs = Path(hydra.utils.to_absolute_path(trained_cfg_path))
trained_cfg = _load_trained_config(trained_cfg_path_abs)
if "hydra" in trained_cfg:
with open_dict(trained_cfg):
del trained_cfg["hydra"]
seed = config.experiment.seed
with open_dict(cfg):
for key in ("morphology", "arena", "environment", "architecture"):
if key in trained_cfg and not _has_cli_override(overrides, key):
base_node = OmegaConf.select(cfg, key)
override_node = OmegaConf.select(trained_cfg, key)
try:
cfg[key] = OmegaConf.merge(base_node, override_node)
except Exception as exc:
raise ValueError(
"Failed to merge trained config into the active Hydra config. "
f"Key={key!r}, trained_config_path='{trained_cfg_path_abs}'."
) from exc
# Convert DictConfig to structured dataclass.
config: BrittleStarConfig = OmegaConf.to_object(cfg)
backend = Backend.MJC
seed = int(config.experiment.seed)
if getattr(config.architecture, "name", None) != "centralized":
raise ValueError(
"simulate.py currently only supports architecture=centralized. "
f"Got architecture.name={getattr(config.architecture, 'name', None)!r}. "
"(Training supports decentralized, but simulation wiring for it isn't implemented.)"
)
model_path_str = config.simulation.model_path
if model_path_str is None:
raise ValueError(
"simulation.model_path must be set to a .flax checkpoint (e.g. final_model.flax)"
)
# Hydra chdir changes CWD; resolve relative paths relative to the invocation.
model_path = Path(hydra.utils.to_absolute_path(model_path_str))
if model_path.suffix != ".flax":
raise ValueError(f"Expected a '.flax' checkpoint, got '{model_path.name}'.")
# ======= ENVIRONMENT SETUP =======
factory = BrittleStarEnvFactory()
raw_env = factory.create_environment(
backend, config.morphology, config.arena, config.environment
backend,
config.morphology,
config.arena,
config.environment,
)
env = BrittleStarEnv(
raw_env,
backend=backend,
config=config.environment,
morphology_config=config.morphology,
)
env = BrittleStarEnv(raw_env, backend=backend, config=config.environment)
state = env.reset(seed=seed)
state0 = env.reset(seed=seed)
# Match training's padded observation layout for amputated morphologies.
padding_masks = compute_padding_masks(config.morphology.segments_per_arm)
# Match training's action clipping behavior.
action_space = getattr(raw_env, "action_space", None)
action_low = (
None if action_space is None else np.asarray(action_space.low, dtype=np.float32).ravel()
)
action_high = (
None if action_space is None else np.asarray(action_space.high, dtype=np.float32).ravel()
)
# ======= MODEL SETUP =======
nu = int(state.mj_model.nu)
nu = int(state0.mj_model.nu)
policy = CleanRLPPOPolicy.load(model_path, action_dim=nu)
if model_path is not None:
# TODO: Refactoring Notice - The .flax checkpoint payload no longer encapsulates the config
# and no longer wraps parameters into a hardcoded list.
# Now natively contains solely the pure raw Jax 'agent_state.params' FrozenDict mapping.
# The entire BrittleStarConfig is safely exported alongside it down at '..._metadata.yaml'.
#
# Example parsed layout from flax.serialization.from_bytes():
# {
# 'sensor_params': FrozenDict({...}),
# 'actor_params': FrozenDict({...}),
# 'critic_params': FrozenDict({...}),
# ...
# }
# Update to support this raw dictionary natively.
policy = RLModel.load(Path(model_path))
if hasattr(policy, "nu"):
policy.nu = nu
else:
model_cls = MODEL_BY_NAME[model_type]
policy = model_cls(seed=seed)
if hasattr(policy, "nu"):
policy.nu = nu
# Helpful early failure when configs don't match the checkpoint.
observations0 = _get_observations(state0)
obs0_dict = pad_observation(observations0 or {}, padding_masks)
env_obs_dim = int(_transform_obs_dict(obs0_dict).shape[0])
ckpt_obs_dim = _infer_checkpoint_obs_dim(policy)
default_seed = int(getattr(policy, "seed", seed))
if ckpt_obs_dim is not None and ckpt_obs_dim != env_obs_dim:
raise ValueError(
"Checkpoint/env mismatch: "
f"checkpoint expects obs_dim={ckpt_obs_dim}, env provides obs_dim={env_obs_dim}. "
"Use the same Hydra config (morphology/arena/environment) "
"that was used during training."
)
# ======= SIMULATION =======
rollout_cfg = SimulationConfig(
realtime=True,
seed=default_seed,
)
headless = bool(config.simulation.headless)
max_steps = config.simulation.max_steps
if headless:
if max_steps is None:
raise ValueError("simulation.max_steps is required when simulation.headless=true")
max_steps_i = int(max_steps)
if max_steps_i <= 0:
raise ValueError("simulation.max_steps must be > 0")
ep_return, ep_len, reached_target, final_dist = _rollout_one_episode_headless(
env=env,
policy=policy,
seed=seed,
max_steps=max_steps_i,
action_low=action_low,
action_high=action_high,
padding_masks=padding_masks,
)
final_dist_str = "n/a" if final_dist is None else f"{final_dist:.3f}"
print(
"episode done: "
f"return={ep_return:.6f}, len={ep_len}, "
f"target_reached={reached_target}, final_xy_dist={final_dist_str}"
)
else:
if max_steps is not None:
max_steps_i = int(max_steps)
if max_steps_i <= 0:
raise ValueError("simulation.max_steps must be > 0")
max_steps_val: int | None = max_steps_i
else:
max_steps_val = None
model_dt = float(state0.mj_model.opt.timestep)
control_dt = model_dt * float(config.environment.num_physics_steps_per_control_step)
_run_one_episode_viewer(
env=env,
policy=policy,
seed=seed,
state=state0,
control_dt=control_dt,
max_steps=max_steps_val,
action_low=action_low,
action_high=action_high,
padding_masks=padding_masks,
)
simulate_policy(policy, rollout_cfg, state)
env.close()

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@ -1,6 +1,5 @@
from dataclasses import dataclass
from typing import Optional
from brittle_star_project.environment.env_types import Backend
@dataclass
@ -8,5 +7,13 @@ class SimulationSettings:
"""Settings for the simulation script."""
model_path: Optional[str] = None
model_type: str = "random"
backend: Backend = Backend.MJX
# Script behavior
headless: bool = False
# If None, viewer mode runs until window closed or target reached.
max_steps: Optional[int] = None
# Optional: point to a Hydra config.yaml from a training run (e.g. runs/.../.hydra/config.yaml).
# When set, the simulation script can override
# morphology/arena/environment/architecture to match.
trained_config_path: Optional[str] = None

View file

@ -6,7 +6,7 @@ from typing import Any
import numpy as np
from .env_config import EnvConfig
from .env_config import EnvConfig, MorphologyConfig
from .env_types import Backend
@ -25,10 +25,18 @@ class BrittleStarEnv:
Goal: hide backend-specific RNG setup and provide a stable place to plug in RL.
"""
def __init__(self, env: Any, *, backend: Backend, config: EnvConfig) -> None:
def __init__(
self,
env: Any,
*,
backend: Backend,
config: EnvConfig,
morphology_config: MorphologyConfig | None = None,
) -> None:
self._env = env
self._backend = backend
self._config = config
self._morphology_config = morphology_config
@property
def raw(self) -> Any:
@ -42,6 +50,10 @@ class BrittleStarEnv:
def config(self) -> EnvConfig:
return self._config
@property
def morphology_config(self) -> MorphologyConfig | None:
return self._morphology_config
def make_rng(self, seed: int):
if self._backend == Backend.MJC:
return np.random.RandomState(seed)

View file

@ -9,6 +9,8 @@ flattened observation maintains the correct physical mapping to the neural netwo
from __future__ import annotations
from typing import Any, Sequence
import jax
import jax.numpy as jnp
# Observation keys whose size scales with the number of joints (2 per segment).
@ -78,11 +80,12 @@ def pad_observation(
"""Pad an observation dict using spatial insertion."""
padded = {}
for key, value in obs.items():
padded_dtype = _padding_dtype(value)
if key in _JOINT_SCALED_KEYS:
out = jnp.zeros(masks["target_size_2x"], dtype=value.dtype)
out = jnp.zeros(masks["target_size_2x"], dtype=padded_dtype)
padded[key] = out.at[masks["mask_2x"]].set(value)
elif key in _SEGMENT_SCALED_KEYS:
out = jnp.zeros(masks["target_size_1x"], dtype=value.dtype)
out = jnp.zeros(masks["target_size_1x"], dtype=padded_dtype)
padded[key] = out.at[masks["mask_1x"]].set(value)
else:
padded[key] = value
@ -97,12 +100,31 @@ def pad_observations_batched(
padded = {}
for key, value in obs.items():
batch_size = value.shape[0]
padded_dtype = _padding_dtype(value)
if key in _JOINT_SCALED_KEYS:
out = jnp.zeros((batch_size, masks["target_size_2x"]), dtype=value.dtype)
out = jnp.zeros((batch_size, masks["target_size_2x"]), dtype=padded_dtype)
padded[key] = out.at[:, masks["mask_2x"]].set(value)
elif key in _SEGMENT_SCALED_KEYS:
out = jnp.zeros((batch_size, masks["target_size_1x"]), dtype=value.dtype)
out = jnp.zeros((batch_size, masks["target_size_1x"]), dtype=padded_dtype)
padded[key] = out.at[:, masks["mask_1x"]].set(value)
else:
padded[key] = value
return padded
def _padding_dtype(value: Any) -> jnp.dtype:
"""Choose a JAX-safe dtype for padding arrays.
When JAX x64 is disabled, allocating float64 zeros emits a warning. We
preserve the original dtype whenever it is supported, and otherwise fall
back to float32 for padding buffers.
"""
dtype = getattr(value, "dtype", None)
if dtype is None:
dtype = jnp.asarray(value).dtype
else:
dtype = jnp.dtype(dtype)
if dtype == jnp.float64 and not jax.config.read("jax_enable_x64"):
return jnp.float32
return dtype

View file

@ -6,6 +6,7 @@ This logger ensures all experimental data is preserved by writing to:
3. stdout (for real-time monitoring)
"""
from enum import Enum
import logging
import yaml
import sys
@ -25,6 +26,33 @@ _active_logger: Optional[Any] = None
_proxy_instance: Optional["LoggerProxy"] = None
def _sanitize_for_yaml(obj: Any) -> Any:
"""Convert non-primitive values into YAML-safe structures.
In particular, avoids PyYAML serializing Enums as
``!!python/object/apply:...`` which OmegaConf will not load.
"""
if isinstance(obj, Enum):
return obj.name
if isinstance(obj, Path):
return str(obj)
if isinstance(obj, (np.generic, jnp.ndarray)):
try:
return obj.item()
except Exception:
pass
if isinstance(obj, np.ndarray):
return obj.tolist()
if isinstance(obj, dict):
return {str(k): _sanitize_for_yaml(v) for k, v in obj.items()}
if isinstance(obj, list):
return [_sanitize_for_yaml(v) for v in obj]
if isinstance(obj, tuple):
return [_sanitize_for_yaml(v) for v in obj]
return obj
def get_logger() -> "LoggerProxy":
"""Retrieve the global LoggerProxy.
@ -216,7 +244,13 @@ class UnifiedLogger:
"""Save configuration to disk."""
try:
with open(self.config_file, "w") as f:
yaml.dump(self.full_config, f, default_flow_style=False, indent=2, sort_keys=False)
yaml.safe_dump(
_sanitize_for_yaml(self.full_config),
f,
default_flow_style=False,
indent=2,
sort_keys=False,
)
self.info(f"Config saved to {self.config_file}")
except Exception as e:
self.error(f"Error saving config: {e}")
@ -296,7 +330,12 @@ class UnifiedLogger:
else:
serializable_metric[k] = v
f.write("---\n")
yaml.dump(serializable_metric, f, default_flow_style=False)
yaml.safe_dump(
_sanitize_for_yaml(serializable_metric),
f,
default_flow_style=False,
sort_keys=False,
)
self.metrics_buffer.clear()
except Exception as e:
self.error(f"Error flushing metrics: {e}")
@ -321,7 +360,13 @@ class UnifiedLogger:
if metadata:
metadata_path = self.checkpoints_dir / f"{prefix}_step_{step}_metadata.yaml"
with open(metadata_path, "w") as f:
yaml.dump(metadata, f, default_flow_style=False)
yaml.safe_dump(
_sanitize_for_yaml(metadata),
f,
default_flow_style=False,
indent=2,
sort_keys=False,
)
self.info(f"Checkpoint saved: {checkpoint_path}")
@ -357,7 +402,13 @@ class UnifiedLogger:
if metadata:
metadata_path = self.run_dir / "final_model_metadata.yaml"
with open(metadata_path, "w") as f:
yaml.dump(metadata, f, default_flow_style=False)
yaml.safe_dump(
_sanitize_for_yaml(metadata),
f,
default_flow_style=False,
indent=2,
sort_keys=False,
)
self.info(f"Final model saved: {final_model_path}")