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[python] Update and add dask

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This commit is contained in:
Tibo De Peuter 2024-03-24 11:54:10 +01:00
parent f7fe12b457
commit 198b31526f
Signed by: tdpeuter
GPG key ID: 38297DE43F75FFE2
2 changed files with 46 additions and 14 deletions
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31
python/native/flake.lock generated
View file

@ -5,11 +5,11 @@
"systems": "systems"
},
"locked": {
"lastModified": 1705309234,
"narHash": "sha256-uNRRNRKmJyCRC/8y1RqBkqWBLM034y4qN7EprSdmgyA=",
"lastModified": 1710146030,
"narHash": "sha256-SZ5L6eA7HJ/nmkzGG7/ISclqe6oZdOZTNoesiInkXPQ=",
"owner": "numtide",
"repo": "flake-utils",
"rev": "1ef2e671c3b0c19053962c07dbda38332dcebf26",
"rev": "b1d9ab70662946ef0850d488da1c9019f3a9752a",
"type": "github"
},
"original": {
@ -20,11 +20,27 @@
},
"nixpkgs": {
"locked": {
"lastModified": 1707956935,
"narHash": "sha256-ZL2TrjVsiFNKOYwYQozpbvQSwvtV/3Me7Zwhmdsfyu4=",
"lastModified": 1711124224,
"narHash": "sha256-l0zlN/3CiodvWDtfBOVxeTwYSRz93muVbXWSpaMjXxM=",
"owner": "NixOS",
"repo": "nixpkgs",
"rev": "a4d4fe8c5002202493e87ec8dbc91335ff55552c",
"rev": "56528ee42526794d413d6f244648aaee4a7b56c0",
"type": "github"
},
"original": {
"owner": "NixOS",
"ref": "nixos-23.11",
"repo": "nixpkgs",
"type": "github"
}
},
"nixpkgs-unstable": {
"locked": {
"lastModified": 1711163522,
"narHash": "sha256-YN/Ciidm+A0fmJPWlHBGvVkcarYWSC+s3NTPk/P+q3c=",
"owner": "NixOS",
"repo": "nixpkgs",
"rev": "44d0940ea560dee511026a53f0e2e2cde489b4d4",
"type": "github"
},
"original": {
@ -37,7 +53,8 @@
"root": {
"inputs": {
"flake-utils": "flake-utils",
"nixpkgs": "nixpkgs"
"nixpkgs": "nixpkgs",
"nixpkgs-unstable": "nixpkgs-unstable"
}
},
"systems": {

29
python/native/flake.nix
View file

@ -1,25 +1,40 @@
{
description = "Python flake with native packages";
inputs.nixpkgs.url = "github:NixOS/nixpkgs/nixos-unstable";
inputs.flake-utils.url = "github:numtide/flake-utils";
inputs = {
nixpkgs.url = "github:NixOS/nixpkgs/nixos-23.11";
nixpkgs-unstable.url = "github:NixOS/nixpkgs/nixos-unstable";
flake-utils.url = "github:numtide/flake-utils";
};
outputs = { self, nixpkgs, flake-utils}:
outputs = { self, nixpkgs, nixpkgs-unstable, flake-utils}:
flake-utils.lib.eachDefaultSystem (system:
let
pkgs = import nixpkgs {
inherit system;
};
pkgs-unstable = import nixpkgs-unstable {
inherit system;
config.allowUnfree = true;
};
python-packages = p: with p; [
biopython
numpy
dask
];
in {
devShells.default = pkgs.mkShell {
packages = with pkgs; [
python312
python312Packages.biopython # Bio-informatics
packages = (with pkgs; [
python311
(python-packages python311Packages)
]) ++ (with pkgs-unstable; [
nodejs
memray
# Editor of your choice
# jetbrains.pycharm-professional
];
# vscodium
]);
};
});
}