#!/bin/bash # hpc_install.sh — Run once on a login node to set up the project environment. # Usage: bash scripts/hpc_install.sh set -euo pipefail # -- Storage: put the venv on $VSC_DATA --------------------------------------- mkdir -p "$VSC_DATA/venvs" ln -sf "$VSC_DATA/venvs" "$VSC_HOME/venvs" # -- Load built-in HPC modules to save space ---------------------------------- # Loading these will automatically load Python 3.11.3 + CUDA + GCC 12.3.0 ml load jax/0.4.25-gfbf-2023a-CUDA-12.1.1 ml load Flax/0.8.4-gfbf-2023a-CUDA-12.1.1 ml load Optax/0.2.2-gfbf-2023a-CUDA-12.1.1 ml load wandb/0.16.1-GCC-12.3.0 ml load matplotlib/3.7.2-gfbf-2023a ml load PyYAML/6.0-GCCcore-12.3.0 ml load FFmpeg/5.1.2-GCCcore-12.3.0 export VENV_PATH="$VSC_DATA/venvs/sel3_${VSC_INSTITUTE_CLUSTER}" # -- Create venv with system-site-packages so it sees the loaded modules ---- python -m venv --system-site-packages "$VENV_PATH" source "$VENV_PATH/bin/activate" # -- Install only the missing lightweight packages --------------------------- # We bypass uv here to strictly adhere to the user's storage limits requirement. pip install --upgrade pip pip install biorobot==0.4.2 evosax==0.2.0 mediapy==1.2.6 tyro>=1.0.10 \ cleanrl>=0.4.8 gymnasium>=1.2.3 PyOpenGL>=3.1.10 PyOpenGL-accelerate>=3.1.10 # -- Register as Jupyter kernel ----------------------------------------------- python -m ipykernel install --user --name="sel3_${VSC_INSTITUTE_CLUSTER}-kernel" echo "✅ Environment created at $VENV_PATH"