chore: Change versions, setup HPC
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6 changed files with 367 additions and 365 deletions
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@ -1 +1 @@
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3.12
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3.11
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@ -1,15 +0,0 @@
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#!/bin/bash
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#PBS -l gpus=1
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#PBS -l walltime=03:00:00
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#PBS -m abe
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module load PyTorch/2.1.2-foss-2023a-CUDA-12.1.1
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module load Optuna/3.5.0-foss-2023a
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cd $PBS_O_WORKDIR
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source training_env/bin/activate
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python main_cnn.py --method train
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18
README.md
18
README.md
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@ -0,0 +1,18 @@
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# neural compression
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## Running locally
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```
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uv sync --all-extras
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```
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## Running on the Ghent University HPC
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See the [Infrastructure docs](https://docs.hpc.ugent.be/infrastructure/#gpu-clusters) for more information about the clusters.
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```
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module swap cluster/joltik # Specify the (GPU) cluster, {joltik,accelgor,litleo}
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qsub job.pbs # Submit job
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qstat # Check status
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```
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30
job.pbs
Normal file
30
job.pbs
Normal file
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@ -0,0 +1,30 @@
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#!/bin/bash
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#PBS -N neural-compression-test-run
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#PBS -l gpus=1
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#PBS -l walltime=00:30:00
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#PBS -m abe
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CACHE_DIR="${VSC_SCRATCH}/.cache" # Directory to use as cache
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UV_DIR="${VSC_SCRATCH}/uv" # Directory to install packages
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#HF_DIR="${CACHE_DIR}/huggingface" # Directory to save models
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module purge
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module load PyTorch-bundle/2.1.2-foss-2023a-CUDA-12.1.1
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module load Optuna/3.5.0-foss-2023a
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cd "${PBS_O_WORKDIR}"
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UV_PYTHON_INSTALL_DIR="${UV_DIR}/python" UV_PYTHON_INSTALL_DIR="${UV_DIR}/python" \
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uv --cache-dir="${CACHE_DIR}/uv" \
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venv "${UV_DIR}/venv" --clear
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source "${UV_DIR}/venv/bin/activate"
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UV_PYTHON_INSTALL_DIR="${UV_DIR}/python" UV_PYTHON_INSTALL_DIR="${UV_DIR}/python" \
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uv --cache-dir="${CACHE_DIR}/uv" \
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sync --active --no-dev
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cd "${PBS_O_WORKDIR}/CNN-model"
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python main_cnn.py --method train
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@ -3,14 +3,16 @@ name = "project-ml"
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version = "0.1.0"
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description = "Add your description here"
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readme = "README.md"
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requires-python = ">=3.12"
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requires-python = ">=3.11"
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dependencies = [
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"datasets>=4.4.1",
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"lorem>=0.1.1",
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"matplotlib>=3.10.7",
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"numpy>=2.3.4",
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"optuna>=4.5.0",
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"torch>=2.9.0",
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"torchdata>=0.11.0",
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"torchvision>=0.24.0",
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]
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[project.optional-dependencies]
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dev = [
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"optuna==4.5.0",
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"torch==2.9.0",
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"torchdata==0.7.1",
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"torchvision==0.24.0",
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]
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651
uv.lock
generated
651
uv.lock
generated
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@ -1,6 +1,10 @@
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version = 1
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revision = 3
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requires-python = ">=3.12"
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requires-python = ">=3.11"
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resolution-markers = [
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"python_full_version >= '3.12'",
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"python_full_version < '3.12'",
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]
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[[package]]
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name = "aiohappyeyeballs"
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@ -26,6 +30,23 @@ dependencies = [
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||||
|
|
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|||
Reference in a new issue